Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_04281 | Not Available | Positive | 5057147 - 5057662 | 19556.9 |
| hypothetical protein | C800_04282 | Not Available | Positive | 5057662 - 5058234 | 21329.5 |
| thiazole biosynthesis protein thih | C800_04283 | Not Available | Positive | 5058323 - 5059453 | 43251.8 |
| hypothetical protein | C800_04284 | Not Available | Positive | 5059533 - 5060225 | 25401.8 |
| hypothetical protein | C800_04285 | Not Available | Negative | 5060338 - 5061462 | 43089.6 |
| hypothetical protein | C800_04286 | Not Available | Negative | 5061475 - 5061828 | 12947.3 |
| hypothetical protein | C800_04287 | Not Available | Positive | 5062048 - 5062656 | 22934.7 |
| ribose-phosphate pyrophosphokinase | C800_04288 | Not Available | Positive | 5062821 - 5063759 | 34190.5 |
| spermidine/putrescine transport system substrate-binding protein | C800_04289 | Not Available | Negative | 5063889 - 5065199 | 50267.1 |
| spermidine/putrescine transport system permease | C800_04290 | Not Available | Negative | 5065227 - 5066018 | 28734.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

