Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 5048640 - 5048712 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 5048725 - 5048808 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5048856 - 5048928 | Not Available |
| carboxynorspermidine decarboxylase | C800_04274 | Not Available | Negative | 5049101 - 5050264 | 44345.1 |
| dna helicase ii/atp-dependent dna helicase pcra | C800_04275 | Not Available | Negative | 5050297 - 5052687 | 91476.7 |
| superoxide dismutase | C800_04276 | Not Available | Positive | 5052796 - 5053413 | 23314.6 |
| thiamine biosynthesis protein this | C800_04277 | Not Available | Positive | 5053809 - 5054009 | 7153.82 |
| thiamine-phosphate pyrophosphorylase | C800_04278 | Not Available | Positive | 5053999 - 5054625 | 23065.1 |
| thiazole synthase | C800_04279 | Not Available | Positive | 5054643 - 5055416 | 27537.5 |
| phosphomethylpyrimidine synthase | C800_04280 | Not Available | Positive | 5055425 - 5057125 | 63507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

