Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apurinic endonuclease (apn1) | C800_00402 | Not Available | Positive | 465100 - 465936 | 31411.4 |
| hypothetical protein | C800_00403 | Not Available | Negative | 466411 - 468483 | 78440.2 |
| pyridoxal-phosphate dependent trpb-like enzyme | C800_00404 | Not Available | Negative | 469103 - 470467 | 50196.2 |
| hypothetical protein | C800_00405 | Not Available | Positive | 470644 - 472491 | 68695.9 |
| trk system potassium uptake protein trka | C800_00406 | Not Available | Positive | 472494 - 473180 | 25637.0 |
| hypothetical protein | C800_00407 | Not Available | Positive | 473395 - 473964 | 21225.6 |
| hypothetical protein | C800_00408 | Not Available | Positive | 474057 - 474497 | 16654.3 |
| l-serine ammonia-lyase | C800_00409 | Not Available | Negative | 474676 - 475884 | 43967.2 |
| hypothetical protein | C800_00410 | Not Available | Negative | 476034 - 477197 | 44506.9 |
| hypothetical protein | C800_00411 | Not Available | Negative | 477218 - 478666 | 54524.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

