Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | C800_04060 | Not Available | Positive | 4804498 - 4805385 | 32432.2 |
| hypothetical protein | C800_04061 | Not Available | Positive | 4805581 - 4808307 | 102892.0 |
| hypothetical protein | C800_04062 | Not Available | Negative | 4808350 - 4808778 | 15643.0 |
| phenylacetate-coa ligase | C800_04063 | Not Available | Negative | 4808790 - 4810088 | 49214.5 |
| hypothetical protein | C800_04064 | Not Available | Positive | 4810202 - 4810849 | 24349.6 |
| 50s ribosomal protein l31 type b | C800_04065 | Not Available | Negative | 4810934 - 4811188 | 9656.59 |
| fructose-1,6-bisphosphate aldolase, class ii | C800_04066 | Not Available | Positive | 4811424 - 4812524 | 40244.3 |
| hypothetical protein | C800_04067 | Not Available | Negative | 4812587 - 4813420 | 32368.0 |
| efflux transporter, rnd family, mfp subunit | C800_04068 | Not Available | Positive | 4813511 - 4814683 | 42597.4 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | C800_04069 | Not Available | Positive | 4814692 - 4817907 | 117283.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

