Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_04040 | Not Available | Positive | 4781056 - 4781682 | 24903.9 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | C800_04041 | Not Available | Positive | 4781701 - 4783005 | 47644.1 |
| ribosome maturation factor rimm | C800_04042 | Not Available | Positive | 4783017 - 4783535 | 19831.7 |
| hypothetical protein | C800_04043 | Not Available | Positive | 4783554 - 4784411 | 32121.4 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | C800_04044 | Not Available | Positive | 4784419 - 4785567 | 42380.3 |
| rip metalloprotease rsep | C800_04045 | Not Available | Positive | 4785624 - 4786967 | 50887.1 |
| hypothetical protein | C800_04046 | Not Available | Negative | 4787106 - 4788089 | 37569.8 |
| hypothetical protein | C800_04047 | Not Available | Negative | 4788055 - 4788435 | 14717.3 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | C800_04048 | Not Available | Negative | 4788967 - 4789425 | 17440.8 |
| anaerobic ribonucleoside-triphosphate reductase | C800_04049 | Not Available | Negative | 4789431 - 4791707 | 86287.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

