Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginyl-trna synthetase | C800_04020 | Not Available | Positive | 4766612 - 4768015 | 53432.1 |
| hypothetical protein | C800_04021 | Not Available | Positive | 4768178 - 4768672 | 18600.8 |
| hypothetical protein | C800_04022 | Not Available | Positive | 4769033 - 4769608 | 21483.9 |
| hypothetical protein | C800_04023 | Not Available | Positive | 4769598 - 4769843 | 9041.7 |
| ribosomal protein l13 | C800_04024 | Not Available | Positive | 4770143 - 4770604 | 17129.7 |
| 30s ribosomal protein s9 | C800_04025 | Not Available | Positive | 4770611 - 4770997 | 14527.7 |
| 30s ribosomal protein s2 | C800_04026 | Not Available | Positive | 4771130 - 4771969 | 30564.9 |
| elongation factor ts | C800_04027 | Not Available | Positive | 4772102 - 4773091 | 35504.8 |
| translation initiation factor 1 | C800_04028 | Not Available | Negative | 4773150 - 4773515 | 13710.6 |
| redox-sensing transcriptional repressor rex | C800_04029 | Not Available | Positive | 4773606 - 4774256 | 24251.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

