Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1 family protein | C800_03989 | Not Available | Positive | 4737548 - 4738099 | 19256.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | C800_03990 | Not Available | Positive | 4738096 - 4738755 | 24286.4 |
| atp-dependent dna helicase recg | C800_03991 | Not Available | Positive | 4738757 - 4740853 | 79759.0 |
| nucleoside diphosphate kinase | C800_03992 | Not Available | Positive | 4741074 - 4741538 | 17401.2 |
| hypothetical protein | C800_03993 | Not Available | Positive | 4741561 - 4742451 | 33332.2 |
| hypothetical protein | C800_03994 | Not Available | Positive | 4742565 - 4743107 | 20764.0 |
| hypothetical protein | C800_03995 | Not Available | Positive | 4743097 - 4744398 | 49991.5 |
| triosephosphate isomerase | C800_03996 | Not Available | Positive | 4744429 - 4745184 | 26875.2 |
| hypothetical protein | C800_03997 | Not Available | Positive | 4745290 - 4745748 | 17067.7 |
| gtp cyclohydrolase 1 | C800_03998 | Not Available | Positive | 4745753 - 4746346 | 22693.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

