Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_00382 | Not Available | Positive | 438654 - 440933 | 86451.3 |
| hypothetical protein | C800_00383 | Not Available | Positive | 441048 - 441224 | 6921.42 |
| hypothetical protein | C800_00384 | Not Available | Negative | 441287 - 442195 | 35212.4 |
| o-succinylbenzoic acid-coa ligase | C800_00385 | Not Available | Negative | 442427 - 443512 | 40554.3 |
| o-succinylbenzoate synthase | C800_00386 | Not Available | Negative | 443509 - 444564 | 39848.0 |
| naphthoate synthase | C800_00387 | Not Available | Negative | 444642 - 445463 | 30339.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | C800_00388 | Not Available | Negative | 445463 - 447136 | 62975.0 |
| isochorismate synthase | C800_00389 | Not Available | Negative | 447163 - 448305 | 43169.4 |
| hypothetical protein | C800_00390 | Not Available | Negative | 448302 - 448709 | 14546.4 |
| mate efflux family protein | C800_00391 | Not Available | Negative | 448801 - 450150 | 49603.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

