Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_03979 | Not Available | Negative | 4726123 - 4726398 | 10421.8 |
| exonuclease sbccd, d subunit | C800_03980 | Not Available | Positive | 4726570 - 4727772 | 44927.8 |
| exonuclease sbcc | C800_03981 | Not Available | Positive | 4727769 - 4730852 | 116266.0 |
| hypothetical protein | C800_03982 | Not Available | Positive | 4730901 - 4731353 | 17226.2 |
| hypothetical protein | C800_03983 | Not Available | Negative | 4732313 - 4733623 | 49681.4 |
| nad+ kinase | C800_03984 | Not Available | Negative | 4733795 - 4734682 | 32784.2 |
| pyridoxine 5'-phosphate synthase | C800_03985 | Not Available | Positive | 4734786 - 4735502 | 26433.6 |
| biopolymer transporter exbb | C800_03986 | Not Available | Positive | 4735499 - 4736215 | 25871.1 |
| biopolymer transporter exbd | C800_03987 | Not Available | Positive | 4736264 - 4736641 | 14365.7 |
| tonb family domain-containing protein | C800_03988 | Not Available | Positive | 4736651 - 4737544 | 31458.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

