Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_03959 | Not Available | Positive | 4687102 - 4688244 | 42528.2 |
| hypothetical protein | C800_03960 | Not Available | Positive | 4688569 - 4689570 | 37779.3 |
| hypothetical protein | C800_03961 | Not Available | Negative | 4689690 - 4691243 | 58484.6 |
| susc/raga family tonb-linked outer membrane protein | C800_03962 | Not Available | Negative | 4691256 - 4694327 | 113286.0 |
| hypothetical protein | C800_03963 | Not Available | Negative | 4694839 - 4695102 | 10198.3 |
| hypothetical protein | C800_03964 | Not Available | Negative | 4695146 - 4697353 | 85369.0 |
| rna polymerase sigma-70 factor, expansion family 1 | C800_03965 | Not Available | Positive | 4697557 - 4698117 | 22126.4 |
| hypothetical protein | C800_03966 | Not Available | Positive | 4698191 - 4699135 | 36240.7 |
| susc/raga family tonb-linked outer membrane protein | C800_03967 | Not Available | Positive | 4699286 - 4702564 | 122411.0 |
| hypothetical protein | C800_03968 | Not Available | Positive | 4702577 - 4704319 | 67438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

