Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_03919 | Not Available | Negative | 4623946 - 4624191 | 9144.0 |
| hypothetical protein | C800_03920 | Not Available | Negative | 4624457 - 4628389 | 149328.0 |
| hypothetical protein | C800_03921 | Not Available | Negative | 4628525 - 4629910 | 51035.4 |
| hypothetical protein | C800_03922 | Not Available | Positive | 4629924 - 4630058 | 4941.45 |
| susc/raga family tonb-linked outer membrane protein | C800_03923 | Not Available | Positive | 4630192 - 4633413 | 116984.0 |
| hypothetical protein | C800_03924 | Not Available | Positive | 4633442 - 4635277 | 68379.2 |
| hypothetical protein | C800_03925 | Not Available | Positive | 4635485 - 4637068 | 61685.0 |
| hexosaminidase | C800_03926 | Not Available | Positive | 4637086 - 4639401 | 87162.8 |
| hypothetical protein | C800_03927 | Not Available | Positive | 4639410 - 4642469 | 116606.0 |
| alpha-l-fucosidase | C800_03928 | Not Available | Positive | 4642487 - 4644346 | 69879.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

