Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_03859 | Not Available | Positive | 4553140 - 4554150 | 38678.5 |
| susc/raga family tonb-linked outer membrane protein | C800_03860 | Not Available | Positive | 4554215 - 4557742 | 131521.0 |
| hypothetical protein | C800_03861 | Not Available | Positive | 4557764 - 4559686 | 73144.0 |
| hypothetical protein | C800_03862 | Not Available | Positive | 4559781 - 4561202 | 53009.9 |
| hypothetical protein | C800_03863 | Not Available | Positive | 4561313 - 4562839 | 57741.4 |
| hypothetical protein | C800_03864 | Not Available | Positive | 4563096 - 4564688 | 59404.7 |
| beta-glucosidase | C800_03865 | Not Available | Negative | 4564778 - 4567372 | 96058.1 |
| succinate coa transferase | C800_03866 | Not Available | Negative | 4567558 - 4569051 | 54010.7 |
| hypothetical protein | C800_03867 | Not Available | Negative | 4569089 - 4569439 | 13516.5 |
| (dimethylallyl)adenosine trna methylthiotransferase miab | C800_03868 | Not Available | Positive | 4569777 - 4571147 | 51936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

