Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_03849 | Not Available | Positive | 4539915 - 4542233 | 88581.0 |
| quinolinate synthetase complex, a subunit | C800_03850 | Not Available | Positive | 4542336 - 4543328 | 36624.0 |
| hypothetical protein | C800_03851 | Not Available | Positive | 4543325 - 4543450 | 4822.11 |
| nucleoside-triphosphatase | C800_03852 | Not Available | Negative | 4543583 - 4544164 | 21352.7 |
| hypothetical protein | C800_03853 | Not Available | Positive | 4544324 - 4544851 | 20733.7 |
| hypothetical protein | C800_03854 | Not Available | Negative | 4544950 - 4545846 | 33215.4 |
| leucyl-trna synthetase | C800_03855 | Not Available | Negative | 4545928 - 4548762 | 108309.0 |
| hypothetical protein | C800_03856 | Not Available | Positive | 4548814 - 4548954 | 5632.07 |
| tricorn protease | C800_03857 | Not Available | Negative | 4549061 - 4552285 | 120701.0 |
| rna polymerase sigma-70 factor, expansion family 1 | C800_03858 | Not Available | Positive | 4552464 - 4553051 | 22777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

