Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_03809 | Not Available | Positive | 4471404 - 4472015 | 24627.9 |
| hypothetical protein | C800_03810 | Not Available | Negative | 4472073 - 4473245 | 42906.5 |
| gluconate 5-dehydrogenase | C800_03811 | Not Available | Negative | 4473342 - 4474145 | 28590.5 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase 1 | C800_03812 | Not Available | Negative | 4474182 - 4475024 | 31850.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | C800_03813 | Not Available | Negative | 4475195 - 4476595 | 52334.6 |
| dihydrolipoyl dehydrogenase | C800_03814 | Not Available | Negative | 4476595 - 4477935 | 47628.7 |
| hypothetical protein | C800_03815 | Not Available | Negative | 4477951 - 4478364 | 15716.4 |
| hypothetical protein | C800_03816 | Not Available | Negative | 4478368 - 4478778 | 15494.5 |
| hypothetical protein | C800_03817 | Not Available | Negative | 4478854 - 4479414 | 21509.0 |
| l-aspartate oxidase | C800_03818 | Not Available | Positive | 4479570 - 4481150 | 58967.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

