Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | C800_03699 | Not Available | Positive | 4329182 - 4329685 | 19260.2 |
| glutamate racemase | C800_03700 | Not Available | Positive | 4329761 - 4330633 | 32418.3 |
| pyridoxal kinase | C800_03701 | Not Available | Positive | 4330690 - 4331562 | 32647.3 |
| lipoprotein-releasing system permease | C800_03702 | Not Available | Negative | 4331949 - 4333187 | 45708.0 |
| ribosome-binding factor a | C800_03703 | Not Available | Negative | 4333197 - 4333532 | 12972.9 |
| hypothetical protein | C800_03704 | Not Available | Negative | 4333606 - 4334244 | 24413.5 |
| pyruvate kinase | C800_03705 | Not Available | Negative | 4334260 - 4335723 | 54241.6 |
| 3-dehydroquinate dehydratase, type ii | C800_03706 | Not Available | Negative | 4335756 - 4336178 | 15666.9 |
| tyrosine recombinase xerd | C800_03707 | Not Available | Positive | 4336245 - 4337186 | 36180.1 |
| hypothetical protein | C800_03708 | Not Available | Positive | 4337328 - 4339004 | 60821.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

