Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna large subunit methyltransferase h | C800_00342 | Not Available | Negative | 391388 - 391861 | 18383.5 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | C800_00343 | Not Available | Positive | 391942 - 392793 | 31226.1 |
| hypothetical protein | C800_00344 | Not Available | Negative | 392898 - 395717 | 107442.0 |
| susc/raga family tonb-linked outer membrane protein | C800_00345 | Not Available | Positive | 395960 - 398998 | 111005.0 |
| hypothetical protein | C800_00346 | Not Available | Positive | 399012 - 400727 | 63842.8 |
| vcbs protein | C800_00347 | Not Available | Positive | 400933 - 401529 | 21300.9 |
| protein reca | C800_00348 | Not Available | Negative | 401603 - 402646 | 37366.7 |
| peroxiredoxin q/bcp | C800_00349 | Not Available | Negative | 402659 - 403105 | 16910.4 |
| saccharopine dehydrogenase (nad+, l-lysine forming) | C800_00350 | Not Available | Negative | 403173 - 404366 | 44966.5 |
| hypothetical protein | C800_00351 | Not Available | Negative | 404450 - 405703 | 47788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

