Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose-h+ transporter | C800_03519 | Not Available | Positive | 4124216 - 4125235 | 36173.2 |
| rhamnulose-1-phosphate aldolase | C800_03520 | Not Available | Positive | 4125321 - 4126130 | 30253.7 |
| hypothetical protein | C800_03521 | Not Available | Positive | 4126339 - 4126836 | 18510.1 |
| hypothetical protein | C800_03522 | Not Available | Positive | 4126967 - 4127887 | 35143.8 |
| hypothetical protein | C800_03523 | Not Available | Positive | 4127895 - 4128893 | 37375.8 |
| hypothetical protein | C800_03524 | Not Available | Negative | 4128919 - 4129776 | 32741.9 |
| beta-galactosidase | C800_03525 | Not Available | Positive | 4129892 - 4132987 | 117587.0 |
| hypothetical protein | C800_03526 | Not Available | Positive | 4133383 - 4135950 | 97456.0 |
| rna polymerase sigma-70 factor, expansion family 1 | C800_03527 | Not Available | Positive | 4136005 - 4136532 | 20705.8 |
| hypothetical protein | C800_03528 | Not Available | Positive | 4136529 - 4137539 | 38621.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

