Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | C800_03118 | Not Available | Negative | 3692440 - 3693111 | 25519.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | C800_03119 | Not Available | Negative | 3693113 - 3693859 | 25994.4 |
| hypothetical protein | C800_03120 | Not Available | Negative | 3693891 - 3694490 | 22662.3 |
| Trna-met | Not Available | Not Available | Positive | 3694722 - 3694797 | Not Available |
| rna polymerase sigma-70 factor, expansion family 1 | C800_03122 | Not Available | Positive | 3695012 - 3695602 | 23788.7 |
| hypothetical protein | C800_03123 | Not Available | Positive | 3695657 - 3696592 | 36546.9 |
| susc/raga family tonb-linked outer membrane protein | C800_03124 | Not Available | Positive | 3696745 - 3700098 | 124332.0 |
| hypothetical protein | C800_03125 | Not Available | Positive | 3700112 - 3701653 | 59311.2 |
| hypothetical protein | C800_03126 | Not Available | Positive | 3701752 - 3704199 | 92720.3 |
| hypothetical protein | C800_03127 | Not Available | Positive | 3704196 - 3706277 | 80552.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

