Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas1, subtype i-c/dvulg | C800_03088 | Not Available | Negative | 3648755 - 3649777 | 38708.3 |
| crispr-associated protein cas4 | C800_03089 | Not Available | Negative | 3649774 - 3650439 | 25838.0 |
| crispr-associated protein cas7/csd2, subtype i-c/dvulg | C800_03090 | Not Available | Negative | 3650449 - 3651333 | 32507.9 |
| crispr-associated protein cas8c/csd1, subtype i-c/dvulg | C800_03091 | Not Available | Negative | 3651353 - 3653068 | 65100.2 |
| crispr-associated protein cas5, subtype i-c/dvulg | C800_03092 | Not Available | Negative | 3653065 - 3653745 | 26800.2 |
| hypothetical protein | C800_03093 | Not Available | Negative | 3653747 - 3654607 | 33274.5 |
| crispr-associated helicase cas3 | C800_03094 | Not Available | Negative | 3654618 - 3656843 | 84283.9 |
| hypothetical protein | C800_03095 | Not Available | Negative | 3656946 - 3657119 | 6879.48 |
| histidyl-trna synthetase | C800_03096 | Not Available | Negative | 3657245 - 3658609 | 50299.7 |
| ribose transport system substrate-binding protein | C800_03097 | Not Available | Negative | 3658768 - 3659586 | 30073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

