Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin | C800_03078 | Not Available | Negative | 3637370 - 3639007 | 58147.1 |
| chaperonin | C800_03079 | Not Available | Negative | 3639049 - 3639321 | 9740.92 |
| [fefe] hydrogenase, group b1/b3 | C800_03080 | Not Available | Positive | 3639417 - 3641168 | 65294.0 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | C800_03081 | Not Available | Positive | 3641177 - 3642211 | 38858.7 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | C800_03082 | Not Available | Positive | 3642224 - 3643642 | 53347.0 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | C800_03083 | Not Available | Positive | 3643706 - 3644896 | 43955.6 |
| hypothetical protein | C800_03084 | Not Available | Negative | 3645082 - 3645987 | 35030.2 |
| hypothetical protein | C800_03085 | Not Available | Negative | 3646580 - 3646909 | 12391.9 |
| hypothetical protein | C800_03086 | Not Available | Negative | 3646913 - 3647302 | 14982.3 |
| crispr-associated endoribonuclease cas2 | C800_03087 | Not Available | Negative | 3648455 - 3648745 | 11015.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

