Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| miniconductance mechanosensitive channel | C800_03038 | Not Available | Negative | 3598856 - 3600049 | 45221.0 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | C800_03039 | Not Available | Negative | 3600166 - 3603282 | 112560.0 |
| efflux transporter, rnd family, mfp subunit | C800_03040 | Not Available | Negative | 3603287 - 3604417 | 41358.6 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | C800_03041 | Not Available | Negative | 3604472 - 3605869 | 52018.1 |
| hypothetical protein | C800_03042 | Not Available | Negative | 3606001 - 3606543 | 19666.0 |
| signal peptidase i | C800_03043 | Not Available | Negative | 3606697 - 3607518 | 32028.7 |
| hypothetical protein | C800_03044 | Not Available | Negative | 3607515 - 3608093 | 22821.9 |
| hypothetical protein | C800_03045 | Not Available | Negative | 3608090 - 3609154 | 40208.2 |
| hypothetical protein | C800_03046 | Not Available | Negative | 3609233 - 3609493 | 9561.44 |
| electron transfer flavoprotein beta subunit | C800_03047 | Not Available | Positive | 3609860 - 3610753 | 31873.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

