Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, expansion family 1 | C800_03028 | Not Available | Negative | 3580345 - 3580926 | 22722.7 |
| atp-binding cassette, subfamily f, member 3 | C800_03029 | Not Available | Negative | 3580966 - 3582600 | 61991.8 |
| aspt/yide/ybjl antiporter duplication domain-containing protein | C800_03030 | Not Available | Negative | 3582716 - 3584386 | 60199.9 |
| methylmalonyl-coa mutase, small subunit | C800_03031 | Not Available | Positive | 3584672 - 3586582 | 70522.5 |
| methylmalonyl-coa mutase large subunit | C800_03032 | Not Available | Positive | 3586592 - 3588742 | 79111.7 |
| hypothetical protein | C800_03033 | Not Available | Negative | 3589065 - 3590555 | 55858.7 |
| susc/raga family tonb-linked outer membrane protein | C800_03034 | Not Available | Negative | 3590569 - 3593814 | 119681.0 |
| hypothetical protein | C800_03035 | Not Available | Negative | 3594254 - 3594616 | 13960.1 |
| hypothetical protein | C800_03036 | Not Available | Negative | 3594761 - 3597070 | 87905.4 |
| hypothetical protein | C800_03037 | Not Available | Positive | 3597241 - 3598737 | 56829.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

