Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | C800_02988 | Not Available | Negative | 3531315 - 3532418 | 39690.2 |
| trna (guanine-n(7)-)-methyltransferase | C800_02989 | Not Available | Negative | 3532426 - 3533184 | 29773.6 |
| hypothetical protein | C800_02990 | Not Available | Negative | 3533307 - 3533933 | 23264.0 |
| branched-chain amino acid aminotransferase | C800_02991 | Not Available | Negative | 3533951 - 3534970 | 37876.2 |
| exodeoxyribonuclease vii small subunit | C800_02992 | Not Available | Negative | 3535151 - 3535354 | 7823.46 |
| exodeoxyribonuclease vii, large subunit | C800_02993 | Not Available | Negative | 3535363 - 3536670 | 49535.8 |
| hypothetical protein | C800_02994 | Not Available | Negative | 3536670 - 3538043 | 49946.9 |
| mate efflux family protein | C800_02995 | Not Available | Positive | 3538165 - 3538914 | 26787.6 |
| hypothetical protein | C800_02996 | Not Available | Positive | 3538914 - 3539534 | 22619.4 |
| hypothetical protein | C800_02997 | Not Available | Positive | 3539588 - 3540217 | 23564.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

