Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | C800_00282 | Not Available | Negative | 328541 - 330553 | 72436.4 |
| hypothetical protein | C800_00283 | Not Available | Negative | 330688 - 332286 | 57760.0 |
| l-arabinose isomerase | C800_00284 | Not Available | Negative | 332389 - 333918 | 57229.3 |
| l-ribulose-5-phosphate 4-epimerase | C800_00285 | Not Available | Negative | 333958 - 334710 | 27539.0 |
| hypothetical protein | C800_00286 | Not Available | Negative | 334715 - 335392 | 26233.5 |
| solute:sodium symporter (sss) family transporter | C800_00287 | Not Available | Negative | 335468 - 337210 | 64485.8 |
| aldose 1-epimerase | C800_00288 | Not Available | Negative | 337237 - 338391 | 41981.6 |
| galactokinase | C800_00289 | Not Available | Negative | 338588 - 339742 | 42994.0 |
| mfs transporter, fhs family, l-fucose permease | C800_00290 | Not Available | Negative | 339783 - 341123 | 47498.5 |
| aldose 1-epimerase | C800_00291 | Not Available | Negative | 341170 - 342264 | 39986.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

