Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | C800_02958 | Not Available | Negative | 3487165 - 3488370 | 43436.1 |
| hypothetical protein | C800_02959 | Not Available | Negative | 3489332 - 3491647 | 89117.5 |
| hypothetical protein | C800_02960 | Not Available | Negative | 3491628 - 3495443 | 144994.0 |
| hypothetical protein | C800_02961 | Not Available | Negative | 3495450 - 3496508 | 40404.4 |
| hypothetical protein | C800_02962 | Not Available | Negative | 3496612 - 3498240 | 62488.4 |
| susc/raga family tonb-linked outer membrane protein | C800_02963 | Not Available | Negative | 3498253 - 3501555 | 121135.0 |
| hypothetical protein | C800_02964 | Not Available | Negative | 3501793 - 3502782 | 38236.0 |
| rna polymerase sigma-70 factor, expansion family 1 | C800_02965 | Not Available | Negative | 3502847 - 3503452 | 23812.8 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | C800_02966 | Not Available | Positive | 3504107 - 3506392 | 84197.2 |
| hypothetical protein | C800_02967 | Not Available | Positive | 3506521 - 3506703 | 6713.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

