Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system atp-binding protein | C800_02738 | Not Available | Positive | 3245870 - 3246538 | 24472.8 |
| abc transporter permease | C800_02739 | Not Available | Positive | 3246547 - 3247344 | 29543.7 |
| hypothetical protein | C800_02740 | Not Available | Positive | 3247403 - 3247681 | 10839.2 |
| ybgi/family dinuclear metal center protein | C800_02741 | Not Available | Positive | 3247743 - 3248837 | 40621.9 |
| hypothetical protein | C800_02742 | Not Available | Positive | 3248846 - 3249637 | 30517.8 |
| hypothetical protein | C800_02743 | Not Available | Negative | 3249738 - 3250115 | 14860.0 |
| amp nucleosidase | C800_02744 | Not Available | Positive | 3250197 - 3251021 | 30983.6 |
| dna polymerase iii, delta subunit | C800_02745 | Not Available | Positive | 3251033 - 3252049 | 38857.2 |
| hypothetical protein | C800_02746 | Not Available | Positive | 3253210 - 3253623 | 15735.5 |
| dihydroorotate dehydrogenase electron transfer subunit | C800_02747 | Not Available | Positive | 3253663 - 3254496 | 30744.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

