Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | C800_02728 | Not Available | Negative | 3235317 - 3235691 | 14212.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | C800_02729 | Not Available | Positive | 3235770 - 3236528 | 28075.6 |
| hypothetical protein | C800_02730 | Not Available | Positive | 3236529 - 3237815 | 48625.5 |
| hypothetical protein | C800_02731 | Not Available | Positive | 3237887 - 3239005 | 42482.8 |
| myo-inositol-1(or 4)-monophosphatase | C800_02732 | Not Available | Positive | 3238989 - 3239801 | 30097.8 |
| hypothetical protein | C800_02733 | Not Available | Positive | 3239877 - 3240542 | 25851.7 |
| hypothetical protein | C800_02734 | Not Available | Positive | 3240579 - 3241019 | 16248.5 |
| 1,4-alpha-glucan branching enzyme | C800_02735 | Not Available | Positive | 3241048 - 3243075 | 78102.2 |
| hypothetical protein | C800_02736 | Not Available | Positive | 3243079 - 3244230 | 43986.6 |
| prolyl-trna synthetase | C800_02737 | Not Available | Positive | 3244345 - 3245835 | 56833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

