Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_02708 | Not Available | Positive | 3213710 - 3215104 | 53456.6 |
| udp-n-acetylglucosamine 2-epimerase | C800_02709 | Not Available | Negative | 3215204 - 3216292 | 40250.0 |
| hypothetical protein | C800_02710 | Not Available | Positive | 3216376 - 3216990 | 22186.8 |
| sigma-70 family rna polymerase sigma factor | C800_02711 | Not Available | Positive | 3217149 - 3217652 | 19667.6 |
| hypothetical protein | C800_02712 | Not Available | Positive | 3217842 - 3219617 | 66766.8 |
| hypothetical protein | C800_02713 | Not Available | Positive | 3219776 - 3220621 | 31689.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | C800_02714 | Not Available | Negative | 3220599 - 3221315 | 27664.0 |
| hypothetical protein | C800_02715 | Not Available | Negative | 3221444 - 3222163 | 24484.1 |
| mate efflux family protein | C800_02716 | Not Available | Negative | 3222212 - 3223555 | 49320.3 |
| serine hydroxymethyltransferase | C800_02717 | Not Available | Negative | 3223754 - 3225034 | 46829.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

