Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | C800_02618 | Not Available | Positive | 3113802 - 3114806 | 36538.8 |
| uracil phosphoribosyltransferase | C800_02619 | Not Available | Negative | 3114963 - 3115622 | 24410.4 |
| phosphoenolpyruvate carboxykinase | C800_02620 | Not Available | Positive | 3115883 - 3117490 | 59092.1 |
| hypothetical protein | C800_02621 | Not Available | Positive | 3117614 - 3118246 | 23161.0 |
| gtp-binding protein typa/bipa | C800_02622 | Not Available | Negative | 3118307 - 3120109 | 67346.3 |
| hypothetical protein | C800_02623 | Not Available | Positive | 3120348 - 3120599 | 10083.2 |
| hypothetical protein | C800_02624 | Not Available | Positive | 3120640 - 3120786 | 5655.8 |
| 30s ribosomal protein s15 | C800_02625 | Not Available | Positive | 3120880 - 3121149 | 10364.5 |
| s-ribosylhomocysteine lyase | C800_02626 | Not Available | Negative | 3121252 - 3121737 | 18487.3 |
| mta/sah nucleosidase | C800_02627 | Not Available | Negative | 3121749 - 3122444 | 25510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

