Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_02508 | Not Available | Positive | 2963957 - 2966860 | 111213.0 |
| hypothetical protein | C800_02509 | Not Available | Positive | 2966884 - 2968581 | 64294.7 |
| dna topoisomerase i | C800_02510 | Not Available | Positive | 2968703 - 2971141 | 91403.2 |
| shikimate kinase | C800_02511 | Not Available | Positive | 2971165 - 2971665 | 19358.2 |
| biosynthetic arginine decarboxylase | C800_02512 | Not Available | Positive | 2971707 - 2973599 | 71492.0 |
| acetylglutamate kinase | C800_02513 | Not Available | Positive | 2973604 - 2974377 | 27207.2 |
| sigma-70 family rna polymerase sigma factor | C800_02514 | Not Available | Positive | 2974441 - 2974950 | 20188.3 |
| hypothetical protein | C800_02515 | Not Available | Positive | 2974940 - 2975419 | 18339.8 |
| hypothetical protein | C800_02516 | Not Available | Negative | 2975617 - 2976348 | 25978.6 |
| hypothetical protein | C800_02517 | Not Available | Positive | 2976455 - 2977159 | 27278.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

