Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | C800_02309 | Not Available | Positive | 2716740 - 2717771 | 39218.2 |
| hypothetical protein | C800_02310 | Not Available | Positive | 2717792 - 2718172 | 14717.3 |
| hypothetical protein | C800_02311 | Not Available | Positive | 2718138 - 2719121 | 37569.8 |
| alpha-l-fucosidase | C800_02312 | Not Available | Positive | 2719209 - 2719490 | 10617.0 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 2719671 - 2720065 | Not Available |
| hypothetical protein | C800_02313 | Not Available | Positive | 2720206 - 2721372 | 42728.9 |
| mannose-6-phosphate isomerase, class i | C800_02314 | Not Available | Negative | 2721464 - 2722435 | 36186.5 |
| hypothetical protein | C800_02315 | Not Available | Negative | 2722549 - 2724126 | 56711.7 |
| tonb-dependent receptor | C800_02316 | Not Available | Negative | 2724163 - 2726928 | 104480.0 |
| threonine aldolase | C800_02317 | Not Available | Positive | 2727094 - 2728110 | 37832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

