Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | C800_02209 | Not Available | Positive | 2546902 - 2547429 | 19600.5 |
| hypothetical protein | C800_02210 | Not Available | Positive | 2547440 - 2548576 | 42716.1 |
| Trna-lys | Not Available | Not Available | Positive | 2548668 - 2548743 | Not Available |
| cardiolipin synthase | C800_02212 | Not Available | Positive | 2549846 - 2551141 | 49752.3 |
| 5,10-methylenetetrahydrofolate reductase | C800_02213 | Not Available | Positive | 2551497 - 2552450 | 36211.4 |
| dna polymerase iii, delta' subunit | C800_02214 | Not Available | Positive | 2552478 - 2553602 | 43533.9 |
| hypothetical protein | C800_02215 | Not Available | Positive | 2553692 - 2555206 | 57732.9 |
| gliding motility-associated lipoprotein gldh | C800_02216 | Not Available | Positive | 2555169 - 2555666 | 18762.5 |
| rod shape-determining protein roda | C800_02217 | Not Available | Negative | 2555670 - 2557124 | 54268.6 |
| penicillin-binding protein 2 | C800_02218 | Not Available | Negative | 2557105 - 2558955 | 69229.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

