Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | C800_02189 | Not Available | Positive | 2511615 - 2512547 | 35128.8 |
| hypothetical protein | C800_02190 | Not Available | Positive | 2512561 - 2513580 | 38266.7 |
| efflux transporter, rnd family, mfp subunit | C800_02191 | Not Available | Positive | 2513667 - 2514743 | 39713.1 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | C800_02192 | Not Available | Positive | 2514763 - 2517798 | 112016.0 |
| hypothetical protein | C800_02193 | Not Available | Positive | 2517795 - 2519114 | 50562.7 |
| apa family basic amino acid/polyamine antiporter | C800_02194 | Not Available | Positive | 2519203 - 2520861 | 59786.5 |
| alpha-n-acetylglucosaminidase | C800_02195 | Not Available | Negative | 2521035 - 2523188 | 82615.3 |
| fumarate hydratase class i, aerobic | C800_02196 | Not Available | Negative | 2523294 - 2524937 | 60487.7 |
| hydrolase coce/nond family protein | C800_02197 | Not Available | Positive | 2525076 - 2526983 | 73940.9 |
| hypothetical protein | C800_02198 | Not Available | Negative | 2527131 - 2529116 | 74479.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

