Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_01957 | Not Available | Negative | 2277683 - 2278405 | 27062.2 |
| hypothetical protein | C800_01958 | Not Available | Negative | 2278392 - 2280539 | 80167.6 |
| aspartate-semialdehyde dehydrogenase | C800_01959 | Not Available | Positive | 2280705 - 2281715 | 37267.8 |
| hypothetical protein | C800_01960 | Not Available | Negative | 2282195 - 2282836 | 23289.7 |
| glycine-trna ligase | C800_01961 | Not Available | Negative | 2282847 - 2284388 | 59436.0 |
| topoisomerase iv subunit a | C800_01962 | Not Available | Positive | 2284540 - 2287233 | 102664.0 |
| hypothetical protein | C800_01963 | Not Available | Positive | 2287237 - 2288082 | 31970.1 |
| hypothetical protein | C800_01964 | Not Available | Positive | 2288091 - 2289119 | 39153.0 |
| Trna-leu | Not Available | Not Available | Positive | 2289188 - 2289272 | Not Available |
| alpha-d-xyloside xylohydrolase | C800_01966 | Not Available | Negative | 2289369 - 2291822 | 93622.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

