Phocaeicola vulgatus dnLKV7

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus dnLKV7 is a Gram-positive, anaerobic rod-shaped bacterium that exhibits a single-cell arrangement. It is classified as mesophilic, indicating that it thrives at moderate temperatures typically found in host-associated environments. This organism is non-motile, despite possessing flagella, which suggests that the flagella might not play a role in locomotion. Phocaeicola vulgatus dnLKV7 is characterized by having two membranes and a single replicon, which aligns with its classification in the phylum Firmicutes. As a free-living bacterium, it engages in biotic relationships that may influence its ecological interactions, particularly in host-associated habitats. Given its anaerobic nature, Phocaeicola vulgatus dnLKV7 likely plays a role in the microbial ecology of the gut, where it may contribute to the fermentation processes and overall homeostasis of the host's microbiome. The presence of this bacterium in host-associated environments underscores the importance of anaerobic bacteria in maintaining gut health and supporting the digestive processes in various organisms. Overall, Phocaeicola vulgatus dnLKV7 is an important member of the microbial community, particularly in environments where anaerobic conditions prevail. Its ability to thrive in such habitats highlights the diverse adaptations of bacteria in response to their ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StraindnLKV7

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus dnLKV7
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus dnLKV7 acPFq-supercont1.17.C36, whole genome

Gene Summary

Adenine Count

1478248 bp

Thymine Count

1465647 bp

Guanine Count

1081650 bp

Cytosine Count

1086149 bp

Genome Length

5111694 bp

Protein-coding Genes

4244 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC800_01807Not AvailablePositive2052512 - 205278710519.9
hypothetical proteinC800_01808Not AvailablePositive2053054 - 205533985274.2
hypothetical proteinC800_01809Not AvailablePositive2055495 - 205582112299.2
hypothetical proteinC800_01810Not AvailableNegative2055721 - 205683043113.3
hypothetical proteinC800_01811Not AvailableNegative2056853 - 205807646287.1
aspartate dehydrogenaseC800_01812Not AvailablePositive2058449 - 205926429219.1
hypothetical proteinC800_01813Not AvailableNegative2059247 - 206013132586.1
dnaj like chaperoneC800_01814Not AvailablePositive2060238 - 206102029022.9
peptide chain release factor 3C800_01815Not AvailableNegative2061095 - 206266359982.5
dtdp-4-dehydrorhamnose reductaseC800_01816Not AvailableNegative2062670 - 206352731996.1

Displaying genes 1811 – 1820 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.