Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase recj domain-containing protein | C800_01707 | Not Available | Negative | 1957029 - 1958069 | 39376.4 |
| competence protein comec | C800_01708 | Not Available | Negative | 1958119 - 1960038 | 72666.6 |
| ribulose-phosphate 3-epimerase | C800_01709 | Not Available | Negative | 1960085 - 1960738 | 23913.3 |
| hypothetical protein | C800_01710 | Not Available | Negative | 1960814 - 1962109 | 48111.7 |
| sigma-70 family rna polymerase sigma factor | C800_01711 | Not Available | Negative | 1962112 - 1962654 | 20885.1 |
| hypothetical protein | C800_01712 | Not Available | Positive | 1962812 - 1963594 | 29095.8 |
| methionyl-trna formyltransferase | C800_01713 | Not Available | Negative | 1963667 - 1964641 | 36638.5 |
| cic family chloride channel protein | C800_01714 | Not Available | Negative | 1964655 - 1966457 | 66950.9 |
| sua5/ycio/yrdc/ywlc family protein | C800_01715 | Not Available | Negative | 1966466 - 1967041 | 21163.3 |
| n-acetylglucosamine-6-phosphate deacetylase | C800_01716 | Not Available | Negative | 1967208 - 1968371 | 42262.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

