Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate lyase | C800_01597 | Not Available | Positive | 1810038 - 1810952 | 33910.9 |
| n-acylglucosamine 2-epimerase | C800_01598 | Not Available | Positive | 1810965 - 1812161 | 46187.0 |
| hypothetical protein | C800_01599 | Not Available | Positive | 1812180 - 1813415 | 44685.5 |
| glucosamine-6-phosphate deaminase | C800_01600 | Not Available | Positive | 1813461 - 1814252 | 29021.6 |
| glucosamine-6-phosphate deaminase | C800_01601 | Not Available | Positive | 1814256 - 1816244 | 74771.3 |
| hypothetical protein | C800_01602 | Not Available | Positive | 1816466 - 1817629 | 45400.7 |
| hypothetical protein | C800_01603 | Not Available | Negative | 1817739 - 1818503 | 29921.8 |
| hypothetical protein | C800_01604 | Not Available | Negative | 1818569 - 1819447 | 34389.8 |
| efflux transporter, rnd family, mfp subunit | C800_01605 | Not Available | Positive | 1819624 - 1820691 | 39261.3 |
| hypothetical protein | C800_01606 | Not Available | Positive | 1820691 - 1823816 | 115893.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

