Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysyl-trna synthetase | C800_01587 | Not Available | Positive | 1794601 - 1796331 | 66493.3 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | C800_01588 | Not Available | Positive | 1796388 - 1797383 | 37117.2 |
| glucose-6-phosphate isomerase | C800_01589 | Not Available | Positive | 1797397 - 1798740 | 49150.9 |
| had hydrolase, family ia | C800_01590 | Not Available | Positive | 1798890 - 1799624 | 27125.4 |
| hypothetical protein | C800_01591 | Not Available | Negative | 1799737 - 1800981 | 47290.9 |
| hypothetical protein | C800_01592 | Not Available | Negative | 1800994 - 1802583 | 60818.8 |
| susc/raga family tonb-linked outer membrane protein | C800_01593 | Not Available | Negative | 1802599 - 1806336 | 139680.0 |
| hypothetical protein | C800_01594 | Not Available | Negative | 1806484 - 1807566 | 41095.2 |
| sigma-70 family rna polymerase sigma factor | C800_01595 | Not Available | Negative | 1807779 - 1808414 | 24920.2 |
| hypothetical protein | C800_01596 | Not Available | Negative | 1808527 - 1809759 | 45744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

