Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | C800_01497 | Not Available | Negative | 1700336 - 1700686 | 13181.3 |
| 50s ribosomal protein l35 | C800_01498 | Not Available | Negative | 1700798 - 1700995 | 7367.31 |
| translation initiation factor if-3 | C800_01499 | Not Available | Negative | 1701067 - 1701663 | 22643.4 |
| threonyl-trna synthetase | C800_01500 | Not Available | Negative | 1701779 - 1703719 | 74231.2 |
| hypothetical protein | C800_01501 | Not Available | Negative | 1703800 - 1705809 | 77292.4 |
| peptide deformylase | C800_01502 | Not Available | Negative | 1705882 - 1706436 | 21050.7 |
| yqgf family rnase h domain-containing protein | C800_01503 | Not Available | Negative | 1706460 - 1706879 | 15804.3 |
| hypothetical protein | C800_01504 | Not Available | Positive | 1707085 - 1708323 | 47727.3 |
| hypothetical protein | C800_01505 | Not Available | Positive | 1708334 - 1709224 | 31093.8 |
| oop family ompa-ompf porin | C800_01506 | Not Available | Positive | 1709280 - 1710353 | 38634.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

