Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii 1 | C800_01467 | Not Available | Negative | 1670129 - 1670485 | 13455.3 |
| hypothetical protein | C800_01468 | Not Available | Negative | 1670603 - 1671322 | 25370.4 |
| ll-diaminopimelate aminotransferase | C800_01469 | Not Available | Negative | 1671447 - 1672676 | 45919.9 |
| diaminopimelate epimerase | C800_01470 | Not Available | Negative | 1672723 - 1673565 | 30311.7 |
| glutamate synthase (nadph/nadh) large chain | C800_01471 | Not Available | Positive | 1674090 - 1678568 | 164882.0 |
| glutamate synthase, nadh/nadph, small subunit | C800_01472 | Not Available | Positive | 1678549 - 1679949 | 51185.7 |
| asparagine synthase (glutamine-hydrolyzing) | C800_01473 | Not Available | Positive | 1679966 - 1681636 | 62923.8 |
| hypothetical protein | C800_01474 | Not Available | Positive | 1681884 - 1682126 | 9724.73 |
| hypothetical protein | C800_01475 | Not Available | Positive | 1682415 - 1683239 | 31868.4 |
| Trna-thr | Not Available | Not Available | Positive | 1683264 - 1683339 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

