Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choloylglycine hydrolase | C800_01457 | Not Available | Positive | 1652629 - 1653687 | 39406.4 |
| hypothetical protein | C800_01458 | Not Available | Positive | 1653922 - 1654380 | 17637.3 |
| hsp20-like protein | C800_01459 | Not Available | Positive | 1654648 - 1655088 | 16811.8 |
| pas domain s-box protein | C800_01460 | Not Available | Negative | 1655329 - 1657674 | 89699.5 |
| carbamoyl-phosphate synthase, large subunit | C800_01461 | Not Available | Negative | 1657889 - 1661113 | 119651.0 |
| carbamoyl-phosphate synthase, small subunit | C800_01462 | Not Available | Negative | 1661137 - 1662213 | 39950.5 |
| amidophosphoribosyltransferase | C800_01463 | Not Available | Negative | 1662239 - 1664122 | 71327.8 |
| glucosamine-fructose-6-phosphate aminotransferase | C800_01464 | Not Available | Negative | 1664285 - 1666129 | 67688.4 |
| glutamine synthetase | C800_01465 | Not Available | Negative | 1666443 - 1668632 | 81979.5 |
| ammonium transporter | C800_01466 | Not Available | Negative | 1668695 - 1670053 | 47682.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

