Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor negative regulatory protein rsec | C800_01347 | Not Available | Negative | 1528602 - 1529063 | 17038.1 |
| threonine ammonia-lyase | C800_01348 | Not Available | Negative | 1529209 - 1530405 | 42410.4 |
| hypothetical protein | C800_01349 | Not Available | Negative | 1530602 - 1531516 | 33484.3 |
| hypothetical protein | C800_01350 | Not Available | Negative | 1531551 - 1532741 | 43351.0 |
| glutamate decarboxylase | C800_01351 | Not Available | Positive | 1532999 - 1534447 | 54672.7 |
| glutaminase | C800_01352 | Not Available | Positive | 1534513 - 1535475 | 34758.9 |
| copper homeostasis protein | C800_01353 | Not Available | Positive | 1535776 - 1536639 | 31413.6 |
| hypothetical protein | C800_01354 | Not Available | Negative | 1536734 - 1539397 | 99239.0 |
| hypothetical protein | C800_01355 | Not Available | Positive | 1539509 - 1540489 | 37927.1 |
| hypothetical protein | C800_01356 | Not Available | Negative | 1540539 - 1541258 | 27695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

