Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | C800_01307 | Not Available | Positive | 1486507 - 1487097 | 22270.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | C800_01308 | Not Available | Positive | 1487139 - 1487858 | 26636.3 |
| imidazole glycerol phosphate synthase subunit hisf | C800_01309 | Not Available | Positive | 1487868 - 1488623 | 27219.5 |
| histidine biosynthesis hisie | C800_01310 | Not Available | Positive | 1488788 - 1489399 | 23137.6 |
| cell division transport system atp-binding protein | C800_01311 | Not Available | Positive | 1489404 - 1490159 | 28375.2 |
| aspartate kinase | C800_01312 | Not Available | Positive | 1490267 - 1491586 | 49296.1 |
| diaminopimelate decarboxylase | C800_01313 | Not Available | Positive | 1491694 - 1492854 | 42749.4 |
| hypothetical protein | C800_01314 | Not Available | Negative | 1492919 - 1493425 | 19772.7 |
| hypothetical protein | C800_01315 | Not Available | Positive | 1493630 - 1494787 | 44788.3 |
| hypothetical protein | C800_01316 | Not Available | Positive | 1494836 - 1495111 | 10430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

