Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | C800_01234 | Not Available | Negative | 1401336 - 1402844 | 56375.6 |
| efflux transporter, rnd family, mfp subunit | C800_01235 | Not Available | Positive | 1403338 - 1404537 | 44405.6 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | C800_01236 | Not Available | Positive | 1404604 - 1407705 | 113097.0 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | C800_01237 | Not Available | Positive | 1407727 - 1409100 | 51796.1 |
| hypothetical protein | C800_01238 | Not Available | Negative | 1409139 - 1410350 | 45667.2 |
| hypothetical protein | C800_01239 | Not Available | Positive | 1410453 - 1411631 | 46146.3 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | C800_01240 | Not Available | Positive | 1411674 - 1415219 | 129303.0 |
| hypothetical protein | C800_01241 | Not Available | Positive | 1415435 - 1416952 | 57849.4 |
| hypothetical protein | C800_01242 | Not Available | Negative | 1417658 - 1418434 | 29121.6 |
| hypothetical protein | C800_01243 | Not Available | Negative | 1418450 - 1418692 | 8960.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

