Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_01172 | Not Available | Negative | 1331379 - 1332134 | 29155.8 |
| hypothetical protein | C800_01173 | Not Available | Positive | 1332245 - 1333687 | 55486.3 |
| hypothetical protein | C800_01174 | Not Available | Positive | 1333701 - 1334171 | 17112.5 |
| upf0365 protein | C800_01175 | Not Available | Positive | 1334317 - 1335315 | 35992.8 |
| uridine phosphorylase | C800_01176 | Not Available | Positive | 1335509 - 1336387 | 32748.5 |
| gaf domain-containing protein | C800_01177 | Not Available | Positive | 1336597 - 1337082 | 18151.8 |
| trna modification gtpase mnme | C800_01178 | Not Available | Positive | 1337093 - 1338589 | 55245.2 |
| excisionase family dna binding domain-containing protein | C800_01179 | Not Available | Positive | 1338858 - 1339748 | 35808.2 |
| hypothetical protein | C800_01180 | Not Available | Positive | 1339866 - 1340981 | 43809.9 |
| hypothetical protein | C800_01181 | Not Available | Positive | 1341161 - 1342159 | 37984.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

