Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C800_01132 | Not Available | Positive | 1302213 - 1302920 | 26402.7 |
| lipoprotein spr | C800_01133 | Not Available | Positive | 1302917 - 1303429 | 19478.6 |
| had hydrolase, family ia | C800_01134 | Not Available | Positive | 1303485 - 1305554 | 79507.0 |
| 50s ribosomal protein l21 | C800_01135 | Not Available | Positive | 1305768 - 1306085 | 11743.4 |
| 50s ribosomal protein l27 | C800_01136 | Not Available | Positive | 1306107 - 1306370 | 9251.19 |
| thiamine pyrophosphokinase | C800_01137 | Not Available | Negative | 1306428 - 1307063 | 23777.5 |
| nicotinamide mononucleotide transporter pnuc | C800_01138 | Not Available | Negative | 1307050 - 1307622 | 22114.5 |
| serine-trna ligase | C800_01139 | Not Available | Positive | 1307742 - 1309016 | 47884.3 |
| hypothetical protein | C800_01140 | Not Available | Negative | 1309027 - 1309143 | 4429.27 |
| glucose/galactose transporter warning | C800_01141 | Not Available | Positive | 1309157 - 1310374 | 43404.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

