Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase (glutamine-hydrolyzing) domain-containing protein | C800_01092 | Not Available | Positive | 1255289 - 1256596 | 48267.4 |
| hypothetical protein | C800_01093 | Not Available | Negative | 1256753 - 1257913 | 42418.8 |
| hypothetical protein | C800_01094 | Not Available | Positive | 1258030 - 1258452 | 16008.7 |
| efflux transporter, rnd family, mfp subunit | C800_01095 | Not Available | Positive | 1258575 - 1259726 | 43842.2 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | C800_01096 | Not Available | Positive | 1259739 - 1262888 | 115634.0 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | C800_01097 | Not Available | Positive | 1262869 - 1264323 | 54799.9 |
| hypothetical protein | C800_01098 | Not Available | Negative | 1264412 - 1264663 | 8688.23 |
| efflux transporter, rnd family, mfp subunit | C800_01099 | Not Available | Positive | 1264903 - 1265928 | 37886.1 |
| hypothetical protein | C800_01100 | Not Available | Positive | 1265949 - 1269008 | 113018.0 |
| hypothetical protein | C800_01101 | Not Available | Positive | 1268995 - 1270284 | 48530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

