Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_01082 | Not Available | Positive | 1245627 - 1246328 | 26605.4 |
| hypothetical protein | C800_01083 | Not Available | Positive | 1246457 - 1246609 | 5511.84 |
| bacterioferritin | C800_01084 | Not Available | Positive | 1246642 - 1247154 | 19740.4 |
| hypothetical protein | C800_01085 | Not Available | Negative | 1247356 - 1248714 | 52952.9 |
| 3-deoxy-8-phosphooctulonate synthase | C800_01086 | Not Available | Negative | 1249006 - 1249803 | 28835.3 |
| yegs//bmru family lipid kinase | C800_01087 | Not Available | Negative | 1249876 - 1250805 | 35331.0 |
| trna dimethylallyltransferase 2 | C800_01088 | Not Available | Negative | 1250811 - 1251734 | 35776.3 |
| glyceraldehyde-3-phosphate dehydrogenase a | C800_01089 | Not Available | Negative | 1251856 - 1252866 | 35961.1 |
| large-conductance mechanosensitive channel | C800_01090 | Not Available | Positive | 1253018 - 1253458 | 15733.6 |
| gmp synthase | C800_01091 | Not Available | Positive | 1253697 - 1255250 | 57645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

