Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-2 c20-methyltransferase | C800_01052 | Not Available | Negative | 1206040 - 1206768 | 27447.1 |
| iron complex transport system substrate-binding protein | C800_01053 | Not Available | Positive | 1206872 - 1208023 | 43319.0 |
| iron complex transport system permease | C800_01054 | Not Available | Positive | 1208035 - 1209072 | 36729.8 |
| iron complex transport system atp-binding protein | C800_01055 | Not Available | Positive | 1209072 - 1210094 | 37672.8 |
| cobalamin biosynthesis protein cbid | C800_01056 | Not Available | Negative | 1210116 - 1211912 | 66027.1 |
| precorrin-4 c11-methyltransferase | C800_01057 | Not Available | Negative | 1211938 - 1213749 | 67051.3 |
| precorrin-6y c5,15-methyltransferase (decarboxylating), cbie subunit | C800_01058 | Not Available | Negative | 1213771 - 1214952 | 44294.9 |
| precorrin-3b c17-methyltransferase | C800_01059 | Not Available | Negative | 1214957 - 1216363 | 51753.8 |
| hypothetical protein | C800_01060 | Not Available | Negative | 1217000 - 1217560 | 20230.2 |
| hypothetical protein | C800_01061 | Not Available | Negative | 1217566 - 1218102 | 19869.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

