Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_01002 | Not Available | Positive | 1154039 - 1154353 | 11444.2 |
| hypothetical protein | C800_01003 | Not Available | Positive | 1154522 - 1154731 | 7947.52 |
| hypothetical protein | C800_01004 | Not Available | Negative | 1154977 - 1155159 | 6926.15 |
| Trna-ala | Not Available | Not Available | Positive | 1155382 - 1155455 | Not Available |
| hypothetical protein | C800_01006 | Not Available | Positive | 1155518 - 1155823 | 11925.3 |
| crossover junction endodeoxyribonuclease ruvc | C800_01007 | Not Available | Positive | 1155820 - 1156389 | 21117.3 |
| pullulanase, type i | C800_01008 | Not Available | Positive | 1156394 - 1158388 | 74625.4 |
| mannonate dehydratase | C800_01009 | Not Available | Positive | 1158446 - 1159624 | 44693.7 |
| nte family protein | C800_01010 | Not Available | Negative | 1159607 - 1161817 | 81953.5 |
| dna polymerase iii subunit epsilon | C800_01011 | Not Available | Positive | 1162025 - 1162513 | 18589.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

